Raptor 3.0.0-rc.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
 
parse_chopper_pack_header.cpp File Reference

Implements raptor::hibf::parse_chopper_pack_header. More...

#include <algorithm>
#include <cassert>
#include <seqan3/std/charconv>
#include <lemon/list_graph.h>
#include <chopper/prefixes.hpp>
#include <raptor/build/hibf/bin_prefixes.hpp>
#include <raptor/build/hibf/parse_chopper_pack_header.hpp>
+ Include dependency graph for parse_chopper_pack_header.cpp:

Namespaces

namespace  raptor::hibf
 Must be first include.
 

Functions

size_t raptor::hibf::parse_chopper_pack_header (lemon::ListDigraph &ibf_graph, lemon::ListDigraph::NodeMap< node_data > &node_map, std::istream &chopper_pack_file)
 

Detailed Description

Implements raptor::hibf::parse_chopper_pack_header.

Author
Enrico Seiler <enrico.seiler AT fu-berlin.de>