Raptor 3.0.0-rc.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
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Files | |
file | bin_size_in_bits.cpp |
Implements raptor::hibf::bin_size_in_bits. | |
file | chopper_build.cpp |
Implements raptor::hibf::chopper_build. | |
file | compute_kmers.cpp |
Implements raptor::hibf::compute_kmers. | |
file | construct_ibf.cpp |
Implements raptor::hibf::construct_ibf. | |
file | create_ibfs_from_chopper_pack.cpp |
Implements raptor::hibf::create_ibfs_from_chopper_pack. | |
file | hierarchical_build.cpp |
Implements raptor::hibf::hierarchical_build. | |
file | initialise_max_bin_kmers.cpp |
Implements raptor::hibf::initialise_max_bin_kmers. | |
file | insert_into_ibf.cpp |
Implements raptor::hibf::insert_into_ibf. | |
file | loop_over_children.cpp |
Implements raptor::hibf::loop_over_children. | |
file | parse_chopper_pack_header.cpp |
Implements raptor::hibf::parse_chopper_pack_header. | |
file | parse_chopper_pack_line.cpp |
Implements raptor::hibf::parse_chopper_pack_line. | |
file | read_chopper_pack_file.cpp |
Implements raptor::hibf::read_chopper_pack_file. | |
file | update_user_bins.cpp |
Implements raptor::hibf::update_user_bins. | |