Raptor 3.0.0-rc.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
 
hibf Directory Reference
+ Directory dependency graph for hibf:

Files

file  bin_size_in_bits.cpp
 Implements raptor::hibf::bin_size_in_bits.
 
file  chopper_build.cpp
 Implements raptor::hibf::chopper_build.
 
file  compute_kmers.cpp
 Implements raptor::hibf::compute_kmers.
 
file  construct_ibf.cpp
 Implements raptor::hibf::construct_ibf.
 
file  create_ibfs_from_chopper_pack.cpp
 Implements raptor::hibf::create_ibfs_from_chopper_pack.
 
file  hierarchical_build.cpp
 Implements raptor::hibf::hierarchical_build.
 
file  initialise_max_bin_kmers.cpp
 Implements raptor::hibf::initialise_max_bin_kmers.
 
file  insert_into_ibf.cpp
 Implements raptor::hibf::insert_into_ibf.
 
file  loop_over_children.cpp
 Implements raptor::hibf::loop_over_children.
 
file  parse_chopper_pack_header.cpp
 Implements raptor::hibf::parse_chopper_pack_header.
 
file  parse_chopper_pack_line.cpp
 Implements raptor::hibf::parse_chopper_pack_line.
 
file  read_chopper_pack_file.cpp
 Implements raptor::hibf::read_chopper_pack_file.
 
file  update_user_bins.cpp
 Implements raptor::hibf::update_user_bins.